RDM and MD Landscape in Earth & Environment

HMC Home -> HMC Hub Earth & Evironment -> Catalogue of Resources

Compilation of Software and Tools

You may filter or search by name and keywords
in the database. This is case insensitiv.



Type:



NameTypeDisciplineKeywords

AARC Policy Development Kit

web service

Subject Agnostic

authentification, authorisation, policy, framework

Access to Memory

repository software

Subject Agnostic

archiving, repository

Activity Stream 2.0

other, specification

Subject Agnostic

repository, resource interactions, web annotation, data sharing

Ambapo

data processing/analysis tool

Earth Science

conversion, transformation, spatial data

AnnoSys

metadata management tool, web service

Earth Science, Biology, Biodiversity

web annotation, specimen data

Apache Daffodil

data processing/analysis tool, metadata management tool

Subject Agnostic

transformation, conversion

ArcGIS

data processing/analysis tool

Earth Science

GIS, spatial data

ArcGIS2ProvO

metadata management tool

Earth Science

GIS, spatial data, provenance

Archivo Ontology Archive

metadata management tool, web service

Subject Agnostic

ontology archive, quality assessment

ARGOS OpenAIRE

web service, metadata management tool

Subject Agnostic

data management plans, planning

Atramhasis

web service, metadata management tool

Subject Agnostic

semantic tech, authoring vocabularies

AWI Data Flow Framework

data processing/analysis tool, metadata management tool

Oceanography

data management, sensors

Badgr.org

other

Subject Agnostic

digital badge issuing

Baseline Surface Radiation Project

other

Earth Science

conversion

bdbag: Big Data Bag Utilities

metadata management tool, data processing/analysis tool

Subject Agnostic

tool, metadata, digital object

Berlin Harvesting and Indexing Toolkit

metadata management tool, other

Earth Science, Biodiversity

indexing, harvesting

BEXIS 2

repository software

Earth Science, Biology, Biodiversity

data management, metadata management, repository, tool

BIIGLE

metadata management tool, web service

Earth Science, Biology, Oceanography

image annotation, marine imaging

Binder

web service, data processing/analysis tool, other

Subject Agnostic

interactive computing environment, reproducibility

BioCASe Provider Software

repository software

Earth Science, Biology

data sharing

Blacklight

metadata management tool

Subject Agnostic

discovery

Blaise - CBS

data processing/analysis tool

Subject Agnostic

survey, statistics

Caris HIPS and SIPS

data processing/analysis tool

Oceanography, Water Research

hydrographic data, data processing

CDMS

experiment/device control software or interface, data processing/analysis tool

Earth Science, Climatology

data management, gridded data

CEDAR Workbench

metadata management tool

Health Science, Medicine

schema.org

CEH semantic web editor

metadata management tool

Earth Science

terminology web editing

CF-Convention Compliance Checker for NetCDF Format

metadata management tool

Earth Science, Climatology

metadata validation

CIRDLES

data processing/analysis tool

Earth Science, Geology, Paleontology

geochronology, workflow management, cyber infrastructure

CKAN

repository software

Subject Agnostic

data management, data access, data publication, portal, data storage

Climate Data Operators

data processing/analysis tool

Earth Science, Climatology

data processing, climate data

Codacy

other

Subject Agnostic

code analysis, digital badge issuing

Code Ocean

data processing/analysis tool

Subject Agnostic

reproducibility, computational research platform

CodeMeta generator

metadata management tool

Subject Agnostic

generate markups, schema.org

CollAborative Environment for Scientific Analysis with Reproducibility

metadata management tool

Biology, Life Science, Earth Science

provenance framework

Content Mine

metadata management tool

Subject Agnostic

data mining, text mining

CONTENTdm

repository software

Subject Agnostic

repository, catalogue, data access

Cordra

repository software, metadata management tool, other

Subject Agnostic

digital object, PID

Core Infrastructure Best Practices

other

Subject Agnostic

code analysis, digital badge issuing

Corelyzer

other

Earth Science, Geology, Paleontology

imagery, visualization, core data

COUNTER

other, specification

Subject Agnostic

usage statistics, repository, metrics

CSDMS Workbench

simulation/modelling software, experiment/device control software or interface

Earth Science

modelling, data processing, standard names, model interface

CSV2ISO_XML

metadata management tool

Earth Science

transformation

Darwin Core Archive Assistant

web service, metadata management tool

Earth Science, Biodiversity

data publication, biodiversity data

Darwin Core Archive Validator

metadata management tool

Earth Science, Biology, Biodiversity

validation, biodiversity data

Data Licenses Clearance Center

other

Subject Agnostic

machine actionable licenses, license library, license search, license creation

Data Stewardship Wizard

metadata management tool, web service

Subject Agnostic

data management plans, planning

Data Type Registry

other

Subject Agnostic

data types, registry, digital object

DataCite Fabrica

metadata management tool, web service

Subject Agnostic

PID, identifier, metadata editing

DataCite Search

web service

Subject Agnostic

search, discovery, indexing, querying

DataHub LinkedIn

repository software, metadata management tool

Subject Agnostic

discovery, search, metadata editing, LinkedIn

DataHub MIT CSAIL

repository software

Subject Agnostic

discovery, data publication, querying, interlinking, visualization

dataone R package

other

Subject Agnostic

interface, R, data access, querying, update, ingest

Dataverse

repository software

Subject Agnostic

discovery, ingest, dissemination, repository

DBpedia Databus

other

Subject Agnostic

access point to knowledge graphs

DCC-RISE

other

Subject Agnostic

infrastructure assessment, evaluation, framework

Dendro

metadata management tool

Subject Agnostic

generate markups, schema.org

Digital Object Architecture

other, specification

Subject Agnostic

digital object, framework

Digital Object Interface Protocol Software Development Kit version 2

other

Subject Agnostic

digital object

Digital Object Interface Protocol Version 2.0

other, specification

Subject Agnostic

digital object, protocol, interface

DigiTool

other

Subject Agnostic

asset management

Diversity Workbench

data processing/analysis tool, metadata management tool, experiment/device control software or interface

Earth Science, Biodiversity

research environment

Docker

other

Subject Agnostic

software containerization, reproducibility

Drupal Ecological Information Management System

metadata management tool, repository software

Earth Science, Biology, Ecology

repository

Dspace

repository software, metadata management tool

Subject Agnostic

repository, discovery, dissemination, ingest

Earth System Model Evaluation Tool

web service, data processing/analysis tool

Earth Science

modelling, evaluation

EcoTaxa

metadata management tool, web service

Earth Science, Biodiversity, Oceanography

image annotation, biodiversity data

Environmental Data Connector

data processing/analysis tool

Earth Science

data integration, spatial data, data access

ePIC API

other, specification

Subject Agnostic

handle, PID, identifier, interface

ePIC Data Type Registry TEST

other

Subject Agnostic

handle, data types, registry, digital object

Eprints

repository software

Subject Agnostic

repository, text publications

ERRDAP

web service, data processing/analysis tool

Earth Science

data integration, spatial data, data storage

Etag

other, specification

Subject Agnostic

repository, usage statistics

EUDAT B2Handle

other, web service

Subject Agnostic

PID, handle, identifier, metadata

EuroDataCube

web service, other

Earth Science

earth observation, data access, data processing, data sharing

excel2rdf

metadata management tool, data processing/analysis tool

Subject Agnostic

authoring vocabularies

ezDMP

metadata management tool, other

Earth Science

data management plans, data management plans, planning

ezEML

metadata management tool

Earth Science, Ecology, Biology

metadata generation

FAIR Evaluator

other

Subject Agnostic

FAIR assessment, interface, metrics, evaluation

FAIRDOM SEEK

experiment/device control software or interface, metadata management tool, data processing/analysis tool, repository software

Subject Agnostic

data sharing, model, SOP, workflow, catalogue

FAIRshake

web service, other

Life Science

FAIR assessment, digital object, metrics, badge

Falcon

data processing/analysis tool, other

Subject Agnostic

named-entity recognition, relation, interlinking

Fedora

repository software

Subject Agnostic

repository, discovery, ingest, preservation, dissemination

Galaxy

data processing/analysis tool, metadata management tool, experiment/device control software or interface, web service

Subject Agnostic

workflow management, data analysis, reproducibility

GCDkit

data processing/analysis tool

Earth Science, Geochemistry

geochemical data

Gen3

experiment/device control software or interface, metadata management tool, web service

Life Science

workflow management, discovery

Generic Sensor API

experiment/device control software or interface, specification

Subject Agnostic

sensors, interface, API

GEO Discovery and Access Broker

other

Earth Science

data access, broker, discovery, querying

GeoBlacklight

repository software

Earth Science

discovery, repository, spatial data

GeoCodes

metadata management tool

Earth Science

generate markups, schema.org

GeoCombine

metadata management tool

Earth Science

metadata, spatial data, indexing, conversion

GeoMapApp

data processing/analysis tool

Oceonography

web map application, visualization, data analysis

GEOMAR Digital Earth Viewer

data processing/analysis tool

Oceonography

subsurface data, visualization

GEOMAR Thredds Server

data processing/analysis tool, metadata management tool, web service

Oceonography

data integration, spatial data

GEOMAR Virtual Earth

data processing/analysis tool

Oceonography

visualization

GeoNetwork

metadata management tool

Earth Science

metadata catalogue service

GeoTIFF library

data processing/analysis tool, metadata management tool

Earth Science

metadata extraction

Geoweaver

experiment/device control software or interface

Earth Science

workflow management, spatial data, artificial intelligence

GFZ Data Organizer

web service, repository software, metadata management tool

Earth Science

data management

GFZ Map Catalogue

web service, other

Earth Science

spatial data, discovery

GFZ Metadata Editor

metadata management tool

Earth Science

metadata editing

GFZ Time Series Management

web service, data processing/analysis tool

Earth Science

visualization, time-series

Gigantum

other

Subject Agnostic

reproducibility, computational research platform

Gleaner

metadata management tool, other

Subject Agnostic

harvesting, schema.org

globus

repository software

Subject Agnostic

commercial, discovery, data access

GMT

data processing/analysis tool

Earth Science

spatial data, conversion, transformation

GND Entity Facts

other

Subject Agnostic

linked data

Google Dataset Search

other

Subject Agnostic

search, discovery

h5py

data processing/analysis tool

Subject Agnostic

programming library, data format

hale studio

metadata management tool

Subject Agnostic

mapping, spatial data

Handle.Net Registry

other

Subject Agnostic

PID, handle, registry

Haplo Repository

repository software

Subject Agnostic

repository, discovery, ingest, dissemination

HMC FAIR Data Commons Collection API /Registry

metadata management tool

Subject Agnostic

digital object, collection

HMC FAIR Data Commons Data Type Registry

metadata management tool

Subject Agnostic

digital object, data types, registry

HMC FAIR Data Commons DirSchema

other

Subject Agnostic

file organisation, packaging, specification

HMC FAIR Data Commons Metadata Standards Catalogue

other

Subject Agnostic

catalogue

HMC FAIR Data Commons Metador

metadata management tool, other

Subject Agnostic

ingest, web annotation

HMC FAIR Data Commons MetaStore2

repository software, metadata management tool

Subject Agnostic

repository software, schema registry

HMC FAIR Data Commons PID Information Types Service

other

Subject Agnostic

PID

HMC FAIR Data Commons Testbed for FAIR DO infrastructure

other

Subject Agnostic

FDO, digital object, testbed

HMC FAIR Data Commons Web Annotation Protocol Server

other

Subject Agnostic

web annotation

HMC KIT Metadata Editor

metadata management tool

Subject Agnostic

metadata editing

Howfairis

other

Subject Agnostic

assessment, metrics

Hypothesis

metadata management tool, web service

Subject Agnostic

web annotation

Hyrax

repository software

Subject Agnostic

repository, ingest, dissemination, preservation, discovery, workflow management

ICAT

repository software, metadata management tool

Subject Agnostic

catalogue

Identifiers.org

other

Life Science

handle, resolver

INSPIRE Interactive Data Specifications

other

Earth Science

application profil browsing

Integrated Publishing Toolkit

metadata management tool, repository software

Biology, Biodiversity

data publication, metadata management, data sharing

Integrated Rule-Oriented Data System

repository software

Subject Agnostic

repository, data publication

International Image Interoperability Framework

other

Subject Agnostic

repository, web annotation, image annotation, interface, API

Invenio

repository software

Subject Agnostic

repository, library

IPFS

other

Subject Agnostic

protocol, data sharing, transfer

iQvoc

metadata management tool, other

Subject Agnostic

vocabulary management system, semantics

Iris

data processing/analysis tool

Subject Agnostic

visualization, analysis, spatial data

ISA framework/tools

metadata management tool, other

Subject Agnostic

metadata management, sample management, experiments

Istat SDMX Framework Project

metadata management tool, other

Social Science

statistics, social science data

Jisc RDM Toolkit

other

Subject Agnostic

training, education

Jupyter Notebooks

data processing/analysis tool, other

Subject Agnostic

code sharing, documentation, reproducibility

JWSOnline

simulation/modelling software

Biology

modelling, kinetics, model storage

Kadi4Mat

repository software

Subject Agnostic

repository software

Keemei

metadata management tool

Bioinformatics

tabular data, validation

KML Generator

other

Geophysics

transformation, conversion

KML Utility

metadata management tool, other

Earth Science

transformation, conversion, metadata extraction

KNIME

other

Subject Agnostic

workflow management, data integration

Labstep

electronic laboratory notebook / LIMS

Subject Agnostic

electronic lab notebook, documentation

LI@GeoX

other

Earth Science

laboratory, infrastructure information system, search, discovery

Linked Data Notifications

other

Subject Agnostic

notification, protocol

Linkedin Data Hub

metadata management tool

Subject Agnostic

metadata management, search, discovery

MacroStrat

data processing/analysis tool

Geology

spatial data, discovery, database

MB-System

data processing/analysis tool

Oceanography

imagery, data processing, visualization

mdEditor

metadata management tool

Subject Agnostic

metadata editing

MediaBank

other

Subject Agnostic

image server, collection

MELTS

simulation/modelling software

Subject Agnostic

modelling

Memento

other

Subject Agnostic

versioning web resources, discovery, preservation, specification

Metacat Metadata and Data Management Server

repository software, metadata management tool

Subject Agnostic

metadata management, search, discovery, data description

MetacatUI

metadata management tool

Subject Agnostic

querying, exchange, discovery, data access

MetadataFromGeodata

metadata management tool

Earth Science

metadata extraction, transformation

metadig-engine

metadata management tool

Subject Agnostic

assessment, metadata, quality assessment, validation

Metafacture

metadata management tool

Subject Agnostic

metadata management

MetaROOT

metadata management tool

Subject Agnostic

semantic tech, machine-actionability, metadata

MIKADO

metadata management tool

Oceanography

metadata editing, metadata generation, transformation, mapping

MOD Finder

web service, other

Omics

search, discovery

Morpho

metadata management tool

Ecology, Biodiversity

metadata editing, metadata generation, transformation, mapping

MOSES DMP tool

metadata management tool

Earth Science

data management plans, planning

my open badge

other

Subject Agnostic

digital badge issuing, certification

MyCoRe

repository software

Subject Agnostic

repository, asset management, library

NCEAS/metadig-checks

metadata management tool, other

Subject Agnostic

assessment, validation

NI4OS License Clearance Tool

other

Subject Agnostic

license, decision making support

NIST CODATA

other

Subject Agnostic

semantics, constants

Noctua

web service, simulation/modelling software

Biology

modelling, model editing

O2A DASHBOARD

data processing/analysis tool

Oceanography

visualization, time-series

OAuth 2.0

other

Subject Agnostic

protocol, authentification

Observable

data processing/analysis tool

Subject Agnostic

reproducibility, computational research platform, visualization

Ocean Data View

data processing/analysis tool

Oceanography

data exploration, visualization

Ocean Video Lab

data processing/analysis tool, metadata management tool

Oceanography

web annotation, visualization

octopus

other

Subject Agnostic

data publication

OCTOPUS

other

Oceanography

conversion, validation

OLS Ontology Search

metadata management tool

Subject Agnostic

lookup, semantic tech

Ontario

metadata management tool

Subject Agnostic

semantic tech

Ontology Lookup Server

other

Subject Agnostic

semantic tech

Ontoserver

metadata management tool

Subject Agnostic

semantic tech, authoring, displaying, discovery, API, governance

Open Archives Initiative Protocol for Metadata Harvesting

other

Subject Agnostic

protocol, discovery, metadata exchange, transfer

Open Badge Factory

other

Subject Agnostic

digital badge issuing

Open Repository

repository software

Subject Agnostic

repository, library

Open Scholar

other

Subject Agnostic

collaboration platform

OpenAIRE - Connect

other

Subject Agnostic

tool, portal

openbadges.me

other, metadata management tool

Subject Agnostic

digital badge issuing

OpenDMP

other

Subject Agnostic

data management plans, planning

OpendTect

data processing/analysis tool

Subject Agnostic

visualization, data processing

openEO

other

Earth Science,Remote Sensing, Geoinformatics

API, interface

OpenID Connect

other

Subject Agnostic

authentification, identification

Openrefine

metadata management tool, data processing/analysis tool

Subject Agnostic

data cleaning

OpenSKOS

metadata management tool

Subject Agnostic

semantic tech

OPUS

repository software

Subject Agnostic

repository, library

OSS Review Toolkit (ORT)

other

Subject Agnostic

license, assessment

PANGAEA® Framework for Metadata Portals

other

Earth Science

metadata portal framework

pangaeapy

metadata management tool

Earth Science

programming library, metadata retrieval, tabular data

pangaear

data processing/analysis tool

Earth Science

programming library, data access, exchange

Planteome Ontology Browser

metadata management tool

Biology, Ecology, Biodiversity

lookup, semantic tech

PoolParty

metadata management tool

Subject Agnostic

authoring, displaying, discovery, API, governance, semantic tech

Protégé

metadata management tool

Subject Agnostic

tool, ontology, authoring, validation, semantic tech

protocols.io

other

Subject Agnostic

workflow management

ProvBook

metadata management tool

Subject Agnostic

provenance extension, research notebook

ProvIt

metadata management tool

Subject Agnostic

linked data, provenance

ProvViewer

metadata management tool

Subject Agnostic

metadata visualization, provenance

PURE

repository software

Subject Agnostic

repository, CRIS

pysummarization

data processing/analysis tool

Subject Agnostic

text processing

QGIS

data processing/analysis tool

Earth Science

GIS, spatial data

QIIME 2

data processing/analysis tool

Bioinformatics

platform, workflow management

QPS Fledermaus

data processing/analysis tool

Earth Science

data processing

QPS Qimera

data processing/analysis tool

Oceanography

data processing

qSKOS

metadata management tool

Subject Agnostic

semantic tech, validation

R Markdown

other

Subject Agnostic

code sharing, documentation, reproducibility

rasdaman

data processing/analysis tool

Earth Science

spatial data, data storage, data cube

RDMinfopool

repository software

Subject Agnostic

catalogue, server-software

RDMO

metadata management tool

Subject Agnostic

data management plans, planning

Re3gistry

other

Subject Agnostic

registry, semantics, code lists, terminologies, lookup

Reconciliation service test bench

other

Subject Agnostic

reconciliation, semantic tech, integration

repo2docker

metadata management tool, data processing/analysis tool

Subject Agnostic

docker, software development, reproducibility

ReproZip

other

Subject Agnostic

packaging, reproducibility

ResearchSpace

electronic laboratory notebook / LIMS

Subject Agnostic

electronic lab notebook, documentation

ResourceSync

other

Subject Agnostic

repository, transfer, exchange

ReSpec

other

Subject Agnostic

writing technical specifications

REUSE

other

Subject Agnostic

license, decision making support

RightField

metadata management tool

Subject Agnostic

web annotation, tabular data, semantic tech

RockD

other

Geology

data access

rrtools

other

Subject Agnostic

reproducibility, coding

SampleDB

metadata management tool, other

Subject Agnostic

repository software, electronic lab notebook, sample management

Schema Generator

metadata management tool

Subject Agnostic

generate markups, schema.org, validation

schema.org

other

Subject Agnostic

semantics, encoding, vocabulary, framework, specification

schema.org Validator

metadata management tool

Subject Agnostic

validation

SchXslt

metadata management tool

Subject Agnostic

transformation, validation

scikit-gstat

data processing/analysis tool

Earth Science

statistics, spatial data

SDMX Mapping Assistant

metadata management tool

Subject Agnostic

mapping

SDMX Tool Repository

other

Subject Agnostic

collection

Seismic Unix

data processing/analysis tool

Geophysics

seismic data, data processing

Sensor Observation Service

metadata management tool

Subject Agnostic

interface, API, sensors, querying

Sentinelsat

metadata management tool

Earth Science, Remote Sensing

search, discovery, data access

SESAR

metadata management tool

Subject Agnostic

earth sample management, sample registration, discovery, data access

Shields.io

other

Subject Agnostic

digital badge issuing

Signposting

other

Subject Agnostic

interlinking, discovery, repository

Simple Web-service Offering Repository Deposit

other

Subject Agnostic

transfer, exchange, protocol

Sirtfi

other

Subject Agnostic

authentification, identification

SISSVoc

other

Subject Agnostic

discovery, displaying, API, semantic tech

Sitemaps

other

Subject Agnostic

discovery, search, repository

SKOS Play!

metadata management tool

Subject Agnostic

semantic tech

Skosify

metadata management tool

Subject Agnostic

semantic tech, validation

Skosmos

other

Subject Agnostic

terminology publication, discovery, querying

Snctfi

other

Subject Agnostic

authentification, identification

Sonar Qube

other

Subject Agnostic

code analysis, digital badge issuing

Sonar Wiz

data processing/analysis tool

Oceanography

data processing, spatial data

SOSO Chrome Plugin

metadata management tool

Subject Agnostic

validation, markup, schema.org

Springer Nature SciGraph Data Explorer

data processing/analysis tool

Subject Agnostic

linked data

Standardized Usage Statistics Harvesting Initiative

other

Subject Agnostic

repository, usage statistics

Structured data testing tool

metadata management tool

Subject Agnostic

validation, schema.org

TemaTres

metadata management tool

Subject Agnostic

semantic tech, authoring, displaying

Terradue Open Source Center

other

Earth Science

earth observation

Thesaurus Query Expander

metadata management tool

Subject Agnostic

semantic tech, querying, data access, interface

ThManager

metadata management tool

Subject Agnostic

semantic tech, authoring, displaying, visualization

TopBraid Composer

metadata management tool

Subject Agnostic

semantic tech, authoring vocabularies

TopBraid Enterprise Data Governance

metadata management tool

Subject Agnostic

authoring, discovery, API, governance

Topsoil

data processing/analysis tool

Geology, Paleontology

visualization, spatial data

Toxicogenomic Fingerprint Browser

data processing/analysis tool

Environemental Science, Biology

visualization, data exploration

Tripoli

data processing/analysis tool

Earth Science, Life Science

visualization, analysis

Tropy

other

Subject Agnostic

imagery, management

TrueOcean - Intelligent Cloud for Maritime Big Data

other

Oceanography

platform, workflow management

UFZ INTOB-DB

experiment/device control software or interface

Environemental Science, Biology

data recording, planning, documentation, electronic lab notebook

UFZ Thredds Server

other

Earth Science

catalogue

UFZ Time Series Management

data processing/analysis tool

Earth Science

visualization, time-series

UNICORE

other

Subject Agnostic

HPC

Universal Analysis Pipeline

data processing/analysis tool

Omics, Bioinformatics

workflow management, data analysis

V-FOR-WaTer

data processing/analysis tool

Water Research

research environment

Virtual Ocean

other

Oceanography

visualization, discovery, querying

Vitro

metadata management tool

Subject Agnostic

ontology editing

Vivo

other

Subject Agnostic

repository, CRIS

VocBench

metadata management tool

Subject Agnostic

terminology management, semantic tech

VocExcel

metadata management tool

Subject Agnostic

semantic tech, authoring vocabularies

VocPrez

metadata management tool

Subject Agnostic

semantic tech, discovery, displaying, API

Web Annotation Model and Web Annotation Protocol

metadata management tool

Subject Agnostic

web annotation, protocol

WebID

other

Subject Agnostic

identification, agent, authentification

WebID/TLS

other

Subject Agnostic

identification, agent, authentification

Webmention

other

Subject Agnostic

interlinking

WebVOWL

metadata management tool

Subject Agnostic

semantic tech, ontology development

Whole Tale

other

Subject Agnostic

packaging, bundling solution, research compendia